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A dataset containing example growth of 96 wells of simulated bacteria or bacteria and phages

Wells A1...A8 through F1...F8 contain 48 different simulated bacterial strains growing alone. Wells G1...G8 through L1...L8 contain the same 48 bacterial strains in an identical layout, but this time growing in the presence of a phage

Usage

example_widedata

Format

A dataframe with 97 rows and 97 variables:

time

time, in seconds, since growth curve began

A1, A2...H11, H12

bacterial density in the given well

Details

Bacterial populations exhibit diauxic growth as they approach their carrying capacity, and they also evolve resistance in the face of selection from the phage population.

This data includes some simulated noise to approximate the noise generated during data collection by plate readers